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Optimization of figure exporting
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@petersenpeter
petersenpeter committed Apr 8, 2020
1 parent 5a21520 commit 9d2de54
Showing 1 changed file with 22 additions and 20 deletions.
42 changes: 22 additions & 20 deletions CellExplorer.m
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Original file line number Diff line number Diff line change
Expand Up @@ -8093,13 +8093,13 @@ function CloseGoTo_dialog(cellIDs)
elseif any(choice == [12,13,14])
% Multiple plots
% Creates summary figures and saves them to '/summaryFigures' or a custom path
exportPlots.dialog = dialog('Position', [300, 300, 300, 370],'Name','Multiple plots','WindowStyle','modal', 'resize', 'on', 'visible','off'); movegui(exportPlots.dialog,'center'), set(exportPlots.dialog,'visible','on')
uicontrol('Parent',exportPlots.dialog,'Style','text','Position',[5, 350, 290, 20],'Units','normalized','String','Select plots to export','HorizontalAlignment','center','Units','normalized');
exportPlots.dialog = dialog('Position', [300, 300, 300, 370],'Name','Multi plot','WindowStyle','modal', 'resize', 'on', 'visible','off'); movegui(exportPlots.dialog,'center'), set(exportPlots.dialog,'visible','on')
uicontrol('Parent',exportPlots.dialog,'Style','text','Position',[5, 350, 290, 20],'Units','normalized','String','Select plots','HorizontalAlignment','center','Units','normalized');
% [selectedActions,tf] = listdlg('PromptString',['Plot actions to perform on ' num2str(length(cellIDs)) ' cells'],'ListString',plotOptions','SelectionMode','Multiple','ListSize',[300,350]);
exportPlots.popupmenu.plotList = uicontrol('Parent',exportPlots.dialog,'Style','listbox','Position',[5, 110, 290, 245],'Units','normalized','String',plotOptions,'HorizontalAlignment','left','Units','normalized','min',1,'max',100);
exportPlots.popupmenu.saveFigures = uicontrol('Parent',exportPlots.dialog,'Style','checkbox','Position',[5, 80, 240, 25],'Units','normalized','String','Save figures','HorizontalAlignment','left','Units','normalized');
uicontrol('Parent',exportPlots.dialog,'Style','text','Position',[5, 62, 140, 20],'Units','normalized','String','File format','HorizontalAlignment','center','Units','normalized');
exportPlots.popupmenu.fileFormat = uicontrol('Parent',exportPlots.dialog,'Style','popupmenu','Position',[5, 40, 140, 25],'Units','normalized','String',{'png','pdf'},'HorizontalAlignment','left','Units','normalized');
exportPlots.popupmenu.fileFormat = uicontrol('Parent',exportPlots.dialog,'Style','popupmenu','Position',[5, 40, 140, 25],'Units','normalized','String',{'png','pdf (slower but vector graphics)'},'HorizontalAlignment','left','Units','normalized');
uicontrol('Parent',exportPlots.dialog,'Style','text','Position',[155, 62, 140, 20],'Units','normalized','String','File path','HorizontalAlignment','center','Units','normalized');
exportPlots.popupmenu.savePath = uicontrol('Parent',exportPlots.dialog,'Style','popupmenu','Position',[155, 40, 140, 25],'Units','normalized','String',{'Clustering path','Cell Explorer','Define path'},'HorizontalAlignment','left','Units','normalized');
uicontrol('Parent',exportPlots.dialog,'Style','pushbutton','Position',[5, 5, 140, 30],'String','OK','Callback',@ClosePlot_dialog,'Units','normalized');
Expand Down Expand Up @@ -8147,11 +8147,16 @@ function ClosePlot_dialog(~,~)
selectedActions = exportPlots.popupmenu.plotList.Value;

if exportPlots.popupmenu.saveFigures.Value == 0
delete(exportPlots.dialog);
saveFig = false;
saveFig.save = false;
else
saveFig = true;
saveFig.save = true;
saveFig.path = exportPlots.popupmenu.savePath.Value;
saveFig.fileFormat = exportPlots.popupmenu.fileFormat.Value;
if saveFig.path == 3 && ~exist('dirNameCustom','var')
dirNameCustom = uigetdir;
end
end
delete(exportPlots.dialog);
if choice == 12 && ~isempty(selectedActions)
% Displayes a new dialog where a number of plot can be combined and plotted for the highlighted cells
plot_columns = min([length(cellIDs),5]);
Expand Down Expand Up @@ -8289,37 +8294,34 @@ function ClosePlot_dialog(~,~)

% Saving figure
savefigure(fig,savePath1,[cell_metrics.sessionName{cellIDs(j)},'.CellExplorer_cell_', num2str(cell_metrics.UID(cellIDs(j)))])

end
end
if saveFig
delete(exportPlots.dialog);
end

function savefigure(fig,savePathIn,fileNameIn)
if saveFig
if exportPlots.popupmenu.savePath.Value == 1
if saveFig.save
if saveFig.path == 1
savePath = fullfile(savePathIn,'summaryFigures');
if ~exist(savePath,'dir')
mkdir(savePathIn,'summaryFigures')
end
elseif exportPlots.popupmenu.savePath.Value == 2
elseif saveFig.path == 2
[dirName,~,~] = fileparts(which('CellExplorer.m'));
savePath = fullfile(dirName,'summaryFigures');
if ~exist(savePath,'dir')
mkdir(dirName,'summaryFigures')
end
elseif exportPlots.popupmenu.savePath.Value == 3
if ~exist('dirName','var')
dirName = uigetdir;
elseif saveFig.path == 3
if ~exist('dirNameCustom','var')
dirNameCustom = uigetdir;
end
savePath = dirName;
savePath = dirNameCustom;
end
if exportPlots.popupmenu.fileFormat.Value == 1
if saveFig.fileFormat == 1
saveas(fig,fullfile(savePath,[fileNameIn,'.png']))
else
set(fig,'Units','Inches');
set(fig,'Units','Inches','Renderer','painters');
pos = get(fig,'Position');
set(fig,'PaperPositionMode','Auto','PaperUnits','Inches','PaperSize',[pos(3), pos(4)])
set(fig,'PaperPositionMode','Auto','PaperUnits','Inches','PaperSize',[pos(3), pos(4)])
print(fig, fullfile(savePath,[fileNameIn,'.pdf']),'-dpdf');
end
end
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