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@ReddyLab

ReddyLab

The Reddy Lab at Duke University

Popular repositories Loading

  1. CRADLE CRADLE Public

    Python 8 4

  2. 1000Genomes 1000Genomes Public

    scripts for processing 1000 Genomes and Geuvadis (RNA) data

    Perl 5

  3. POPSTARR2 POPSTARR2 Public

    Pipeline for processing whole-genome Population STARR-seq data

    Python 2 1

  4. chip-seq-qc-app chip-seq-qc-app Public

    Forked from darrylyan46/chip-seq-qc-app

    A MEAN web application that visualizes and displays ChIP-seq QC metrics for assessing and validating sample quality.

    TypeScript 2

  5. GCRN GCRN Public

    Repository for the Glucocorticoid Response Network project

    1

  6. BaseSpaceFastqDownload BaseSpaceFastqDownload Public

    Code to download fastq files to server directly from Illumina BaseSpace

    Python 1

Repositories

Showing 10 of 39 repositories
  • cegs-portal Public

    CCGR Portal

    ReddyLab/cegs-portal’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Mar 10, 2025
  • ccgr_portal_cov_viz Public

    Experiment Coverage libraries and application

    ReddyLab/ccgr_portal_cov_viz’s past year of commit activity
    Rust 0 0 0 0 Updated Jan 29, 2025
  • ReddyLab/ccgr_portal_data_loading’s past year of commit activity
    Python 0 0 0 0 Updated Jan 23, 2025
  • ReddyLab/Proj_ENCODE_FCC’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 20, 2025
  • ggr-cwl-ipynb-gen Public

    Jupyter notebook generator to download and execute the processing files for GGR related datasets

    ReddyLab/ggr-cwl-ipynb-gen’s past year of commit activity
    Python 0 MIT 6 5 0 Updated Jan 15, 2025
  • PyLiftRe Public

    A library for creating scripts to do genomic liftovers on custom file types.

    ReddyLab/PyLiftRe’s past year of commit activity
    Python 0 0 0 0 Updated Nov 21, 2024
  • IGVF-cwl Public Forked from Duke-GCB/GGR-cwl

    CWL tools and workflows for IGVF and more

    ReddyLab/IGVF-cwl’s past year of commit activity
    Common Workflow Language 0 MIT 17 0 0 Updated Nov 20, 2024
  • ReddyLab/Proj_CombEffect_STARRseq’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 13, 2024
  • Genoverse Public Forked from DECIPHER-genomics/Genoverse

    HTML5 scrollable genome browser

    ReddyLab/Genoverse’s past year of commit activity
    JavaScript 0 45 0 0 Updated Oct 24, 2024
  • CRADLE Public
    ReddyLab/CRADLE’s past year of commit activity
    Python 8 MIT 4 1 0 Updated Oct 16, 2024