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Add install info to GIS applications #1723

Merged
merged 13 commits into from
Aug 2, 2023
Merged

Add install info to GIS applications #1723

merged 13 commits into from
Aug 2, 2023

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samumantha
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@samumantha samumantha commented Jul 11, 2023 •
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Installation info added to almost all GIS applications.

SAGA in r-env, link to be added if r-env gets install info.

please squash and merge

@samumantha @oscarkraemer
@joonas-somero @mariavd @robinkar @mvsjober @amsaren
add citations and install instructions
888dd4b 
* Add object storage to allas instructions for rclone (#1710)

* add object storage to allas instructions for rclone

* Add note on Allas config

* Make it more clear that users needs to allowe IP

Previously database instances were created so that connections
from 0.0.0.0/0 were allowed by default. I'm assuming that this
"just worked" for some users that might find this change confusing.
With this change I try to make sure that the users will actually
define some allowed cidrs.

DBAAS-117

* Further development on command line tutorial (#1699)

* Directory to folder for consistency

* Added explanations, links, headings

* Rewording, additions, and so on

* Renamed file, underlined os-agnostic section

* Update link

* A suggestion about the hotkeys section; small other changes

* A screenshot about git for Windows mouse settings

* Added some tips, reworded some content

* Reworded relation to linked tutorial

Simplified command in script

* Add explicit path to commands

* Remove/add empty lines for consistency

* More compact screenshot

* Fixes, rewordings, clarifications

* Added a few words on commands

* Minor corrections

* Some notes about passphrases

* Removed redundant text

* Update GETTING_STARTED.md

Minor word changes

---------

Co-authored-by: Maria Dimitrova <[email protected]>
Co-authored-by: Maria Dimitrova <[email protected]>

* Puhti web interface R16 (#1713)

* Add changes for Puhti web interface R16

* RStudio r-env/4.3.0 available.
* Blender 3.6.0 available.

* Add note about web interface session length

* Add new python-data/3.10-23.07 version

* Web interfaces as systems (#1690)

* Add web interfaces as systems

* Define availability in front matter

* Replace spaces with dashes in link anchor

* Remove repeated 'Available on'

* Revert "Define availability in front matter"

This reverts commit 0aa5ecb.

* Reorder systems

* List web interfaces separately

Additionally, some refactoring

* Available in Puhti and Mahti web interfaces

* Update page and make it a SectionPage for 'Interactive apps'

* More apps for web interfaces

* Fix outdated information

* Documentation on web interface tags

* Fixed heading

Newline to end of file

* Revert "Available in Puhti and Mahti web interfaces"

This reverts commit 0054436.

* Partially revert "More apps for web interfaces"

This partially reverts commit a82140e.

* Adjust punctuation and whitespace for consistency

* Added interactive applications

* Alphabetization

* Remove accidental whitespace

* Note to instructions about pull request not updating

---------

Co-authored-by: Ari-Matti Saren <[email protected]>

* add lastools citation info

* separate acknowledgement section

* add cc installation

* Add GDAL citation

* citation info to geoconda

* add geoconda installation

* force citation and installation

* typo fix

* typo fix

* add citation and installation grass

* typo fix

* add installation info lastools

* add installation and citation

* Add citation and installation for otb

* pcl citation and installation added

* pdal added citation and install

* qgis add citation and install

* qgis rm duplicate install instructions

* SAGA add citation

* s2c citation and install added

* add sen2mosaic install

* snap add citation and install

* wbt install and citation

* add zonation install and citation

* link fix

* link fix

* link fix

---------

Co-authored-by: Oscar Kraemer <[email protected]>
Co-authored-by: Joonas Somero <[email protected]>
Co-authored-by: Maria Dimitrova <[email protected]>
Co-authored-by: Maria Dimitrova <[email protected]>
Co-authored-by: Robin Karlsson <[email protected]>
Co-authored-by: Mats Sjöberg <[email protected]>
Co-authored-by: Ari-Matti Saren <[email protected]>
@samumantha samumantha requested a review from ktiits July 11, 2023 11:49
@samumantha samumantha mentioned this pull request Jul 11, 2023
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@samumantha samumantha changed the title WIP: add install info to GIS applications Add install info to GIS applications Aug 1, 2023
@samumantha samumantha marked this pull request as ready for review August 1, 2023 08:53
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@samumantha
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For prefix I would not put /appl/soft/... path anywhere. Users cannot install there. Neither just "versionnumber" or such but rather /path/to/where/you/want/to/install/the/tool or something like this, so that they understand what that path is?

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The yml files could maybe also rather be collected in the singularity recipe repository than geocomputing?

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ktiits commented Aug 2, 2023

For prefix I would not put /appl/soft/... path anywhere. Users cannot install there. Neither just "versionnumber" or such but rather /path/to/where/you/want/to/install/the/tool or something like this, so that they understand what that path is?

Removed all /appl/soft beginnings and prefix after to "install_dir".

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ktiits commented Aug 2, 2023

The yml files could maybe also rather be collected in the singularity recipe repository than geocomputing?

I was wondering which to choose and had no clear preference. You had the geoconda one in Geocomputing, so added there. The other is more common, so somebody might not like that we "pollute" it with other stuff..

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all committed, ready for review

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@ktiits ktiits merged commit 4a5e7d7 into master Aug 2, 2023
@ktiits ktiits deleted the swi_install branch August 2, 2023 14:29
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